GeneScoreR - Gene Scoring from Count Tables
Provides methods for automatic calculation of gene scores
from gene count tables, including a Z-score method that
requires a table of samples being scored and a count table with
control samples; a geometric mean method that does not rely on
control samples; and a principal component-based method that
summarizes gene expression using user-selected principal
components. The Z-score and geometric mean approaches are
described in Kim et al. (2018) <doi:10.1089/jir.2017.0127>.